Using an unsupervised Isolation Forest, how does one identify the optimal number of outliers from the anomaly scores?ML algorithms for defining NORMAL user behaviorHow to set the Reconstruction error threshold for anomaly detection using autoencoders?How to compare two unsupervised anomaly detection algorithms on the same data-set?

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Using an unsupervised Isolation Forest, how does one identify the optimal number of outliers from the anomaly scores?


ML algorithms for defining NORMAL user behaviorHow to set the Reconstruction error threshold for anomaly detection using autoencoders?How to compare two unsupervised anomaly detection algorithms on the same data-set?













2












$begingroup$


I am using an unsupervised isolation forest algorithm and computing anomaly scores to detect outliers from a 2 dimensional toy dataset. From a scatter plot, I am able to detect/visualize the data points with the highest anomaly scores (example: top 10 or top 15 outliers from the data)as my outliers. Is the number of outliers subjective to user decision (for example:Anomaly score of 0.5>S>1 is an outlier and everything less than 0.5 is not) or is there a way to detect the optimal number of outliers based on the anomaly scores?



Outlier detection using Isolation Forest










share|improve this question











$endgroup$







  • 1




    $begingroup$
    Hello! Welcome to our community! Would you mind posting your plot, just to illustrate? Maybe we can identify a certain kind of distribution. For example in a Gaussian distribution we consider a sample to be outlier if it differs from the mean by $2sigma$
    $endgroup$
    – Pedro Henrique Monforte
    Apr 9 at 19:01















2












$begingroup$


I am using an unsupervised isolation forest algorithm and computing anomaly scores to detect outliers from a 2 dimensional toy dataset. From a scatter plot, I am able to detect/visualize the data points with the highest anomaly scores (example: top 10 or top 15 outliers from the data)as my outliers. Is the number of outliers subjective to user decision (for example:Anomaly score of 0.5>S>1 is an outlier and everything less than 0.5 is not) or is there a way to detect the optimal number of outliers based on the anomaly scores?



Outlier detection using Isolation Forest










share|improve this question











$endgroup$







  • 1




    $begingroup$
    Hello! Welcome to our community! Would you mind posting your plot, just to illustrate? Maybe we can identify a certain kind of distribution. For example in a Gaussian distribution we consider a sample to be outlier if it differs from the mean by $2sigma$
    $endgroup$
    – Pedro Henrique Monforte
    Apr 9 at 19:01













2












2








2





$begingroup$


I am using an unsupervised isolation forest algorithm and computing anomaly scores to detect outliers from a 2 dimensional toy dataset. From a scatter plot, I am able to detect/visualize the data points with the highest anomaly scores (example: top 10 or top 15 outliers from the data)as my outliers. Is the number of outliers subjective to user decision (for example:Anomaly score of 0.5>S>1 is an outlier and everything less than 0.5 is not) or is there a way to detect the optimal number of outliers based on the anomaly scores?



Outlier detection using Isolation Forest










share|improve this question











$endgroup$




I am using an unsupervised isolation forest algorithm and computing anomaly scores to detect outliers from a 2 dimensional toy dataset. From a scatter plot, I am able to detect/visualize the data points with the highest anomaly scores (example: top 10 or top 15 outliers from the data)as my outliers. Is the number of outliers subjective to user decision (for example:Anomaly score of 0.5>S>1 is an outlier and everything less than 0.5 is not) or is there a way to detect the optimal number of outliers based on the anomaly scores?



Outlier detection using Isolation Forest







unsupervised-learning data-science-model






share|improve this question















share|improve this question













share|improve this question




share|improve this question








edited Apr 9 at 19:08







user71207

















asked Apr 9 at 18:34









user71207user71207

112




112







  • 1




    $begingroup$
    Hello! Welcome to our community! Would you mind posting your plot, just to illustrate? Maybe we can identify a certain kind of distribution. For example in a Gaussian distribution we consider a sample to be outlier if it differs from the mean by $2sigma$
    $endgroup$
    – Pedro Henrique Monforte
    Apr 9 at 19:01












  • 1




    $begingroup$
    Hello! Welcome to our community! Would you mind posting your plot, just to illustrate? Maybe we can identify a certain kind of distribution. For example in a Gaussian distribution we consider a sample to be outlier if it differs from the mean by $2sigma$
    $endgroup$
    – Pedro Henrique Monforte
    Apr 9 at 19:01







1




1




$begingroup$
Hello! Welcome to our community! Would you mind posting your plot, just to illustrate? Maybe we can identify a certain kind of distribution. For example in a Gaussian distribution we consider a sample to be outlier if it differs from the mean by $2sigma$
$endgroup$
– Pedro Henrique Monforte
Apr 9 at 19:01




$begingroup$
Hello! Welcome to our community! Would you mind posting your plot, just to illustrate? Maybe we can identify a certain kind of distribution. For example in a Gaussian distribution we consider a sample to be outlier if it differs from the mean by $2sigma$
$endgroup$
– Pedro Henrique Monforte
Apr 9 at 19:01










1 Answer
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$begingroup$

The way Isolation Forests seem to be used in most of the cases involve having some kind of prior "guess" about what proportion of outliers you expect (if you want to be on the safe side, you might be encline to increase it for instance). Based on the proportion you set (it is the contamination parameter in scikit-learn), the observations are labeled according to their anomaly score.



That being said, nothing prevents you from coming up with your own rules after you ran the Isolation Forest. You can plot the anomaly scores and then see for yourself if another threshold could make sense based on the distribution of the scores. This would be a more empirical rule.






share|improve this answer









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    $begingroup$

    The way Isolation Forests seem to be used in most of the cases involve having some kind of prior "guess" about what proportion of outliers you expect (if you want to be on the safe side, you might be encline to increase it for instance). Based on the proportion you set (it is the contamination parameter in scikit-learn), the observations are labeled according to their anomaly score.



    That being said, nothing prevents you from coming up with your own rules after you ran the Isolation Forest. You can plot the anomaly scores and then see for yourself if another threshold could make sense based on the distribution of the scores. This would be a more empirical rule.






    share|improve this answer









    $endgroup$

















      0












      $begingroup$

      The way Isolation Forests seem to be used in most of the cases involve having some kind of prior "guess" about what proportion of outliers you expect (if you want to be on the safe side, you might be encline to increase it for instance). Based on the proportion you set (it is the contamination parameter in scikit-learn), the observations are labeled according to their anomaly score.



      That being said, nothing prevents you from coming up with your own rules after you ran the Isolation Forest. You can plot the anomaly scores and then see for yourself if another threshold could make sense based on the distribution of the scores. This would be a more empirical rule.






      share|improve this answer









      $endgroup$















        0












        0








        0





        $begingroup$

        The way Isolation Forests seem to be used in most of the cases involve having some kind of prior "guess" about what proportion of outliers you expect (if you want to be on the safe side, you might be encline to increase it for instance). Based on the proportion you set (it is the contamination parameter in scikit-learn), the observations are labeled according to their anomaly score.



        That being said, nothing prevents you from coming up with your own rules after you ran the Isolation Forest. You can plot the anomaly scores and then see for yourself if another threshold could make sense based on the distribution of the scores. This would be a more empirical rule.






        share|improve this answer









        $endgroup$



        The way Isolation Forests seem to be used in most of the cases involve having some kind of prior "guess" about what proportion of outliers you expect (if you want to be on the safe side, you might be encline to increase it for instance). Based on the proportion you set (it is the contamination parameter in scikit-learn), the observations are labeled according to their anomaly score.



        That being said, nothing prevents you from coming up with your own rules after you ran the Isolation Forest. You can plot the anomaly scores and then see for yourself if another threshold could make sense based on the distribution of the scores. This would be a more empirical rule.







        share|improve this answer












        share|improve this answer



        share|improve this answer










        answered Apr 10 at 1:43









        MaximeKanMaximeKan

        1011




        1011



























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